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ONTOLOGY REPORT - ANNOTATIONS

Term:ribonucleoside diphosphate metabolic process
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Accession:GO:0009185 term browser browse the term
Definition:The chemical reactions and pathways involving a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: ribonucleoside diphosphate metabolism

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ribonucleoside diphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC119627902 ribonucleoside-diphosphate reductase subunit M2-like involved_in IEA Ensembl GO_REF:0000107
G LOC119627903 ribonucleoside-diphosphate reductase subunit M2-like involved_in IEA Ensembl GO_REF:0000107
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:62,606,112...62,649,979
Ensembl chr 1:62,604,486...62,650,200 		JBrowse link
G RRM2 ribonucleotide reductase regulatory subunit M2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:97,512,690...97,519,734
Ensembl chr14:97,512,832...97,521,932 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in ISO (PMID:16376858) ComplexPortal PMID:16376858 NCBI chr 8:97,055,111...97,091,980 JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 8:97,055,012...97,092,182 JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 involved_in ISO
IEA		 RGD
UniProt		 PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chr12:10,251,793...10,261,635
Ensembl chr12:10,256,054...10,261,465 		JBrowse link
G AK2 adenylate kinase 2 involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:5123889 GO_REF:0000002 GO_REF:0000104 RGD:5490208 NCBI chr20:99,834,286...99,863,071
Ensembl chr20:99,834,334...99,858,781 		JBrowse link
G AK3 adenylate kinase 3 involved_in ISO
IEA		 RGD
UniProt		 PMID:5010295 PMID:5123889 GO_REF:0000104 RGD:5490208 RGD:5490216 NCBI chr12:74,801,673...74,832,838
Ensembl chr12:74,801,671...74,835,475 		JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (PMID:28746349) MGI PMID:28746349 NCBI chr 1:54,318,746...54,374,361
Ensembl chr 1:54,316,334...54,373,619 		JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (PMID:17502665) MGI PMID:17502665 NCBI chr 9:88,921,826...89,034,418
Ensembl chr 9:88,922,007...89,032,880 		JBrowse link
G NT5E 5'-nucleotidase ecto involved_in ISO (PMID:28746349)
(PMID:20430891)		 MGI PMID:20430891 PMID:28746349 NCBI chr13:10,115,591...10,162,178
Ensembl chr13:10,116,161...10,160,414 		JBrowse link
G NUDT9 nudix hydrolase 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11825615) Ensembl
MGI		 PMID:11825615 GO_REF:0000107 NCBI chr 7:35,807,679...35,843,543
Ensembl chr 7:35,807,702...35,847,101 		JBrowse link
ADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within		 ISO (MGI:5529149|PMID:23078545)
(PMID:23439682)		 CACAO
MGI		 PMID:23078545 PMID:23439682 MGI:5529149 NCBI chr 1:54,318,746...54,374,361
Ensembl chr 1:54,316,334...54,373,619 		JBrowse link
G BAD BCL2 associated agonist of cell death involved_in ISO (MGI:3778846|PMID:18223655) UniProt PMID:18223655 MGI:3778846 NCBI chr 1:9,949,717...9,964,433
Ensembl chr 1:9,949,762...9,964,432 		JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENO1 enolase 1 involved_in ISO (PMID:29775581)
PMID:15041191
(PMID:3529090)		 UniProt
CAFA		 PMID:3529090 PMID:15041191 PMID:29775581 RGD:2302788 NCBI chr20:122,884,846...122,902,669
Ensembl chr20:122,884,727...122,903,372 		JBrowse link
G ENO2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr11:6,945,243...6,954,959
Ensembl chr11:6,945,413...6,957,304 		JBrowse link
G ENO3 enolase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:4,431,321...4,439,742
Ensembl chr16:4,431,436...4,439,786 		JBrowse link
G FOXK1 forkhead box K1 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:30700909) UniProt
Ensembl		 PMID:30700909 GO_REF:0000107 NCBI chr28:16,875,747...16,962,813
Ensembl chr28:16,880,884...16,962,734 		JBrowse link
G FOXK2 forkhead box K2 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:6281052|PMID:30700909) UniProt
Ensembl		 PMID:30700909 GO_REF:0000107 MGI:6281052 NCBI chr16:74,426,111...74,506,453
Ensembl chr16:74,426,105...74,503,373 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:10777777), (PMID:28918937)
(PMID:12581789)		 MGI PMID:10777777 PMID:12581789 PMID:28918937 NCBI chr11:6,569,029...6,572,877 JBrowse link
G HK1 hexokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:61,917,501...62,029,737
Ensembl chr 9:61,917,440...62,001,843 		JBrowse link
G LOC103230584 uncharacterized LOC103230584 involved_in ISO (PMID:28049690) MGI PMID:28049690 NCBI chr 5:26,588,932...26,606,722
Ensembl chr 5:26,588,868...26,592,112 		JBrowse link
G LOC119623417 beta-enolase involved_in IEA Ensembl GO_REF:0000107
G PFKL phosphofructokinase, liver type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:88,035,409...88,063,376
Ensembl chr 2:88,035,347...88,063,442 		JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19696889) TreeGrafter
MGI		 PMID:19696889 GO_REF:0000118 NCBI chr11:44,332,857...44,378,273
Ensembl chr11:44,334,605...44,377,877 		JBrowse link
G PFKP phosphofructokinase, platelet involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:3,130,701...3,191,590
Ensembl chr 9:3,130,566...3,191,576 		JBrowse link
G PGAM1 phosphoglycerate mutase 1 involved_in ISO (PMID:12189148) UniProt PMID:12189148 NCBI chr 9:90,581,593...90,585,054 JBrowse link
G PGAM2 phosphoglycerate mutase 2 involved_in ISO (PMID:23951293) MGI PMID:23951293 NCBI chr21:14,604,127...14,609,196
Ensembl chr21:14,606,401...14,609,158 		JBrowse link
G PGK1 phosphoglycerate kinase 1 involved_in ISO (PMID:30174313) MGI PMID:30174313 NCBI chr  X:67,072,029...67,093,881 JBrowse link
G PKM pyruvate kinase M1/2 involved_in ISO (PMID:28630053) MGI PMID:28630053 NCBI chr26:11,224,332...11,255,538 JBrowse link
G TPI1 triosephosphate isomerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,900,762...6,904,188
Ensembl chr11:6,900,787...6,906,787 		JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:3010881 GO_REF:0000118 RGD:5133253 NCBI chr20:85,541,796...85,584,167
Ensembl chr20:85,541,205...85,584,068 		JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chr25:1,579,382...1,587,623
Ensembl chr25:1,579,610...1,587,419 		JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chr 8:21,528,520...21,574,330
Ensembl chr 8:21,543,888...21,574,311 		JBrowse link
G NUDT18 nudix hydrolase 18 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:20,176,500...20,184,637 JBrowse link
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 8:20,176,422...20,178,959 JBrowse link
GDP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr25:1,579,382...1,587,623
Ensembl chr25:1,579,610...1,587,419 		JBrowse link
G LRGUK leucine rich repeats and guanylate kinase domain containing involved_in IEA GOC GO_REF:0000108 NCBI chr21:102,753,877...102,884,558
Ensembl chr21:102,755,344...102,884,003 		JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within ISO (PMID:19696889) MGI PMID:19696889 NCBI chr11:44,332,857...44,378,273
Ensembl chr11:44,334,605...44,377,877 		JBrowse link
glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADPGK ADP dependent glucokinase involved_in IEA UniProt GO_REF:0000043 NCBI chr26:10,693,211...10,726,606
Ensembl chr26:10,693,291...10,725,594 		JBrowse link
G ALDOA aldolase, fructose-bisphosphate A involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 Ensembl chr 5:26,588,868...26,592,112 JBrowse link
G ALDOB aldolase, fructose-bisphosphate B involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr12:37,993,367...38,021,693
Ensembl chr12:38,007,265...38,021,258 		JBrowse link
G ALDOC aldolase, fructose-bisphosphate C involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr16:22,342,750...22,346,811
Ensembl chr16:22,341,318...22,346,620 		JBrowse link
G BPGM bisphosphoglycerate mutase involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr21:103,336,777...103,369,396
Ensembl chr21:103,336,809...103,372,186 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:23437220) MGI PMID:23437220 NCBI chr 2:89,608,525...89,649,823 JBrowse link
G ENO1 enolase 1 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr20:122,884,846...122,902,669
Ensembl chr20:122,884,727...122,903,372 		JBrowse link
G ENO2 enolase 2 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr11:6,945,243...6,954,959
Ensembl chr11:6,945,413...6,957,304 		JBrowse link
G ENO3 enolase 3 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr16:4,431,321...4,439,742
Ensembl chr16:4,431,436...4,439,786 		JBrowse link
G ENO4 enolase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23446454) InterPro
MGI
TreeGrafter
UniProt		 PMID:23446454 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr 9:109,658,378...109,695,425
Ensembl chr 9:109,660,889...109,692,999 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29259245) MGI PMID:29259245 NCBI chr13:41,670,416...41,755,549 JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31296900) Ensembl
MGI		 PMID:31296900 GO_REF:0000107 NCBI chr 6:40,100,399...40,128,340
Ensembl chr 6:40,126,321...40,127,808 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in IEA
ISO		 UniProt
TreeGrafter
RGD		 PMID:28258188 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:13792662 NCBI chr11:6,569,029...6,572,877 JBrowse link
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15546993), (PMID:19759366) UniProt
MGI
TreeGrafter		 PMID:15546993 PMID:19759366 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr 6:30,458,076...30,470,139
Ensembl chr 6:30,458,383...30,470,139 		JBrowse link
G GCK glucokinase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:4273555 PMID:4353083 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302790 RGD:2302851 NCBI chr21:14,475,723...14,523,086
Ensembl chr21:14,507,902...14,523,850 		JBrowse link
G GPI glucose-6-phosphate isomerase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15665293)
(PMID:8417789)		 UniProt
MGI
TreeGrafter
InterPro
Ensembl		 PMID:8417789 PMID:15665293 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,404,067...29,451,290
Ensembl chr 6:29,403,500...29,453,162 		JBrowse link
G HK1 hexokinase 1 involved_in IEA
ISO		 InterPro
TreeGrafter
RGD
UniProt		 PMID:4353083 PMID:15574336 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:1358232 RGD:2302851 NCBI chr 9:61,917,501...62,029,737
Ensembl chr 9:61,917,440...62,001,843 		JBrowse link
G HK2 hexokinase 2 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr14:32,385,237...32,443,864
Ensembl chr14:32,385,249...32,442,403 		JBrowse link
G HK3 hexokinase 3 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr23:78,888,087...78,908,608
Ensembl chr23:78,888,291...78,906,995 		JBrowse link
G HKDC1 hexokinase domain containing 1 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr 9:62,051,098...62,099,986
Ensembl chr 9:62,052,027...62,099,221 		JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17408640) Ensembl
MGI		 PMID:17408640 GO_REF:0000107 NCBI chr 3:24,820,029...24,884,472
Ensembl chr 3:24,820,035...24,883,432 		JBrowse link
G IER3 immediate early response 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19096392) Ensembl
MGI		 PMID:19096392 GO_REF:0000107 NCBI chr17:41,712,539...41,713,895
Ensembl chr17:41,712,528...41,714,126 		JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807535) Ensembl
MGI		 PMID:25807535 GO_REF:0000107 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488 		JBrowse link
G LOC103217002 pyruvate kinase PKM involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr10:22,075,426...22,077,770 JBrowse link
G LOC103230363 phosphoglycerate mutase 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr25:30,608,930...30,610,406
Ensembl chr25:30,609,601...30,610,365 		JBrowse link
G LOC103233975 phosphoglycerate kinase 1-like involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000117 GO_REF:0000118 NCBI chr 6:11,273,677...11,275,200 JBrowse link
G LOC103244719 glyceraldehyde-3-phosphate dehydrogenase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr23:45,943,203...45,944,474 JBrowse link
G LOC103248994 glyceraldehyde-3-phosphate dehydrogenase-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr 3:2,980,930...2,982,197 JBrowse link
G LOC119623417 beta-enolase involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118
G LOC119623700 pyruvate kinase PKM-like involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118
G PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:22,277,692...22,306,057
Ensembl chr25:22,286,305...22,305,490 		JBrowse link
G PFKL phosphofructokinase, liver type involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:2931076 PMID:4273555 PMID:4353083 PMID:6458283 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:2301239 RGD:2302736 RGD:2302790 RGD:2302851 NCBI chr 2:88,035,409...88,063,376
Ensembl chr 2:88,035,347...88,063,442 		JBrowse link
G PFKM phosphofructokinase, muscle involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:2931076 PMID:8593533 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:1599363 RGD:2302736 NCBI chr11:44,332,857...44,378,273
Ensembl chr11:44,334,605...44,377,877 		JBrowse link
G PFKP phosphofructokinase, platelet involved_in IEA
ISO		 UniProt
RGD
InterPro		 PMID:2931076 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:2302736 NCBI chr 9:3,130,701...3,191,590
Ensembl chr 9:3,130,566...3,191,576 		JBrowse link
G PGAM1 phosphoglycerate mutase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:90,581,593...90,585,054 JBrowse link
G PGAM2 phosphoglycerate mutase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15665293) UniProt
MGI
InterPro		 PMID:15665293 GO_REF:0000002 GO_REF:0000043 NCBI chr21:14,604,127...14,609,196
Ensembl chr21:14,606,401...14,609,158 		JBrowse link
G PGK1 phosphoglycerate kinase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15665293) RGD
MGI
TreeGrafter
UniProt
InterPro		 PMID:3091090 PMID:6405813 PMID:15665293 GO_REF:0000002 GO_REF:0000041 GO_REF:0000117 GO_REF:0000118 RGD:2302859 RGD:2302860 NCBI chr  X:67,072,029...67,093,881 JBrowse link
G PGK2 phosphoglycerate kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19759366) UniProt
MGI
TreeGrafter
InterPro		 PMID:19759366 GO_REF:0000002 GO_REF:0000041 GO_REF:0000117 GO_REF:0000118 NCBI chr17:22,619,062...22,621,157
Ensembl chr17:22,619,615...22,620,868 		JBrowse link
G PKLR pyruvate kinase L/R involved_in ISO
IEA		 RGD
TreeGrafter
InterPro
UniProt		 PMID:4273555 PMID:4353083 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302790 RGD:2302851 NCBI chr20:8,540,228...8,547,184
Ensembl chr20:8,540,763...8,545,884 		JBrowse link
G PKM pyruvate kinase M1/2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:7262549), (PMID:7295297) RGD
TreeGrafter
MGI
InterPro
UniProt		 PMID:4273555 PMID:7262549 PMID:7295297 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302790 NCBI chr26:11,224,332...11,255,538 JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,717,144...104,732,005
Ensembl chr10:104,718,680...104,730,005 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20935145) Ensembl
MGI		 PMID:20935145 GO_REF:0000107 NCBI chr11:4,354,911...4,381,762
Ensembl chr11:4,355,053...4,381,273 		JBrowse link
G TPI1 triosephosphate isomerase 1 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr11:6,900,762...6,904,188
Ensembl chr11:6,900,787...6,906,787 		JBrowse link
G UCP2 uncoupling protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:65,238,311...65,246,841
Ensembl chr 1:65,235,775...65,246,450 		JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALK1 galactokinase 1 acts_upstream_of_or_within ISO (PMID:10915771) MGI PMID:10915771 NCBI chr16:45,919,316...45,926,423
Ensembl chr16:45,919,402...45,926,304 		JBrowse link
G GALT galactose-1-phosphate uridylyltransferase acts_upstream_of_or_within ISO (PMID:11286504) MGI PMID:11286504 NCBI chr12:45,970,655...45,974,669
Ensembl chr12:45,970,794...45,974,581 		JBrowse link
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKL phosphofructokinase, liver type acts_upstream_of_or_within
involved_in		 ISO (PMID:8172601), (PMID:9287040)
(PMID:35530161)		 MGI PMID:8172601 PMID:9287040 PMID:35530161 NCBI chr 2:88,035,409...88,063,376
Ensembl chr 2:88,035,347...88,063,442 		JBrowse link
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within
involved_in		 ISO (PMID:17595219)
(PMID:19889946)
(PMID:25796446)
(PMID:2521854)		 MGI
CAFA		 PMID:2521854 PMID:17595219 PMID:19889946 PMID:25796446 NCBI chr11:44,332,857...44,378,273
Ensembl chr11:44,334,605...44,377,877 		JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) UniProt PMID:17828264 MGI:3759354 NCBI chr 1:7,708,595...7,724,634
Ensembl chr 1:7,705,725...7,724,589 		JBrowse link
G CBFA2T3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:23840896) UniProt PMID:23840896 NCBI chr 5:74,260,516...74,361,268
Ensembl chr 5:74,263,375...74,289,875 		JBrowse link
G DDIT4 DNA damage inducible transcript 4 acts_upstream_of_or_within ISO (PMID:20176937) MGI PMID:20176937 NCBI chr 9:59,033,058...59,035,157
Ensembl chr 9:59,032,755...59,035,241 		JBrowse link
G FBP1 fructose-bisphosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:108,452,856...108,484,052
Ensembl chr12:108,453,156...108,483,775 		JBrowse link
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:16,245,840...16,271,465
Ensembl chr16:16,245,715...16,267,698 		JBrowse link
G GIT1 GIT ArfGAP 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,313,629...23,329,665
Ensembl chr16:23,315,439...23,329,469 		JBrowse link
G HDAC4 histone deacetylase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:125,098,375...125,450,524
Ensembl chr10:125,098,366...125,403,227 		JBrowse link
G IER3 immediate early response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19096392) Ensembl
MGI		 PMID:19096392 GO_REF:0000107 NCBI chr17:41,712,539...41,713,895
Ensembl chr17:41,712,528...41,714,126 		JBrowse link
G LOC103223491 peroxisome proliferator-activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:28,614,892...28,709,272
Ensembl chr19:28,615,413...28,708,763 		JBrowse link
G MYOG myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chr25:26,264,872...26,269,652
Ensembl chr25:26,266,717...26,268,867 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,442,315...15,629,411
Ensembl chr16:15,462,640...15,628,512 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,382,125...26,385,605
Ensembl chr 5:26,382,132...26,385,348 		JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in ISO (PMID:19955185) BHF-UCL PMID:19955185
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:22343369 RGD:7242186 NCBI chr27:25,882,385...26,563,530
Ensembl chr27:26,465,499...26,564,582 		JBrowse link
G SIK2 salt inducible kinase 2 involved_in ISO (PMID:21084751) MGI PMID:21084751 NCBI chr 1:102,944,171...103,070,973
Ensembl chr 1:102,944,281...103,068,823 		JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:4881401|PMID:20141841), (MGI:5619441|PMID:23217706)
(PMID:26456828)		 CACAO
UniProt		 PMID:20141841 PMID:23217706 PMID:26456828 MGI:4881401 MGI:5619441 NCBI chr 6:3,924,230...3,932,583
Ensembl chr 6:3,924,230...3,932,590 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22891351) Ensembl
MGI		 PMID:22891351 GO_REF:0000107 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20935145) Ensembl
MGI
TreeGrafter		 PMID:20935145 GO_REF:0000107 GO_REF:0000118 NCBI chr11:4,354,911...4,381,762
Ensembl chr11:4,355,053...4,381,273 		JBrowse link
G TRIM63 tripartite motif containing 63 involved_in ISO (PMID:34244144) FlyBase PMID:34244144 NCBI chr20:106,676,299...106,714,394
Ensembl chr20:106,703,949...106,716,656 		JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:51,015,810...51,077,444
Ensembl chr  X:51,016,318...51,071,977 		JBrowse link
G PPP2CA protein phosphatase 2 catalytic subunit alpha involved_in ISO (PMID:32192773) MGI PMID:32192773 NCBI chr23:36,999,110...37,028,916
Ensembl chr23:36,997,078...37,029,280 		JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:16155866)
(PMID:23292513)		 MGI PMID:16155866 PMID:23292513 NCBI chr 6:12,743,752...12,759,155 JBrowse link
G SLC4A1 solute carrier family 4 member 1 (Diego blood group) acts_upstream_of_or_within ISO (PMID:18698006) MGI PMID:18698006 NCBI chr16:62,126,370...62,146,192
Ensembl chr16:62,131,709...62,146,182 		JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,037,224...66,320,860
Ensembl chr 2:66,037,261...66,321,306 		JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr24:53,630,998...53,762,098 JBrowse link
G GCK glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chr21:14,475,723...14,523,086
Ensembl chr21:14,507,902...14,523,850 		JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11147825) Ensembl
MGI		 PMID:11147825 GO_REF:0000107 NCBI chr11:46,329,479...46,339,227
Ensembl chr11:46,331,569...46,337,439 		JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17408640) Ensembl
MGI		 PMID:17408640 GO_REF:0000107 NCBI chr 3:24,820,029...24,884,472
Ensembl chr 3:24,820,035...24,883,432 		JBrowse link
G IFNG interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473 		JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chr11:97,624,498...97,708,730
Ensembl chr11:97,631,189...97,707,308 		JBrowse link
G INS insulin involved_in ISO (PMID:381941)
(PMID:7688386)		 BHF-UCL PMID:381941 PMID:7688386 NCBI chr 1:1,965,128...1,969,090 JBrowse link
G INSR insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,625,951...6,803,610
Ensembl chr 6:6,630,777...6,803,592 		JBrowse link
G KAT2B lysine acetyltransferase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,769,590...64,885,536
Ensembl chr15:64,770,185...64,886,219 		JBrowse link
G MIF macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chr19:7,000,837...7,001,700
Ensembl chr19:7,000,793...7,001,757 		JBrowse link
G MLX MAX dimerization protein MLX involved_in ISO (PMID:14742444) MGI PMID:14742444 NCBI chr16:63,714,934...63,720,466
Ensembl chr16:63,716,012...63,720,408 		JBrowse link
G MLXIPL MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,442,520...9,465,772 JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chr 8:122,282,989...122,288,392
Ensembl chr 8:122,282,630...122,288,384 		JBrowse link
G P2RX7 purinergic receptor P2X 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:116,505,975...116,560,151
Ensembl chr11:116,529,346...116,563,059 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 4:39,516,307...39,553,627 JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr20:76,258,063...76,319,512
Ensembl chr20:76,259,763...76,319,430 		JBrowse link
G PRXL2C peroxiredoxin like 2C involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:106,486,772...106,500,124
Ensembl chr12:106,486,811...106,499,618 		JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132 		JBrowse link
G SLC4A4 solute carrier family 4 member 4 acts_upstream_of ISO (MGI:5295108|PMID:21976511)
(PMID:21976511)		 ARUK-UCL PMID:21976511 MGI:5295108 NCBI chr 7:19,581,399...20,043,334 JBrowse link
G SLC4A4 solute carrier family 4 member 4 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:19,657,971...19,999,956 JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chr 2:26,344,480...26,367,448
Ensembl chr 2:26,343,450...26,367,776 		JBrowse link
G UCHL1 ubiquitin C-terminal hydrolase L1 involved_in ISO (PMID:34244144) FlyBase PMID:34244144 NCBI chr27:9,074,961...9,086,606
Ensembl chr27:9,074,923...9,086,517 		JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:65,715,470...66,528,195
Ensembl chr22:66,511,237...66,524,064 		JBrowse link
positive regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in ISO PMID:12230553 FlyBase PMID:12230553 RGD:405650381 NCBI chr  X:51,015,810...51,077,444
Ensembl chr  X:51,016,318...51,071,977 		JBrowse link
purine ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 acts_upstream_of_or_within ISO (PMID:11929769) MGI PMID:11929769 NCBI chr 9:88,921,826...89,034,418
Ensembl chr 9:88,922,007...89,032,880 		JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 acts_upstream_of_or_within ISO (PMID:11929769) MGI PMID:11929769 NCBI chr12:1,137,500...1,142,798
Ensembl chr12:1,137,495...1,143,231 		JBrowse link
regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL2 ADP ribosylation factor like GTPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,212,903...9,219,985
Ensembl chr 1:9,213,123...9,219,927 		JBrowse link
G EIF6 eukaryotic translation initiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:56,185,419...56,190,993
Ensembl chr 2:56,184,679...56,191,012 		JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17437992) Ensembl
MGI		 PMID:17437992 GO_REF:0000107 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288 		JBrowse link
G IL3 interleukin 3 acts_upstream_of_or_within ISO (PMID:17437992) MGI PMID:17437992 NCBI chr23:34,894,630...34,899,105 JBrowse link
G JMJD8 jumonji domain containing 8 involved_in ISO (PMID:27199445) UniProt PMID:27199445 NCBI chr 5:601,462...604,342
Ensembl chr 5:602,597...604,182 		JBrowse link
G MLXIPL MLX interacting protein like ISO RGD PMID:11724780 RGD:634534 NCBI chr28:9,442,520...9,465,772 JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:61,351,047...61,393,541
Ensembl chr  X:61,351,054...61,394,305 		JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in ISO (PMID:15877279) BHF-UCL PMID:15877279 NCBI chr21:119,738,976...120,058,831
Ensembl chr21:119,738,967...119,970,972 		JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within ISO (PMID:15857891) MGI PMID:15857891 NCBI chr10:104,717,144...104,732,005
Ensembl chr10:104,718,680...104,730,005 		JBrowse link
G SLC2A6 solute carrier family 2 member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,649,140...4,665,609
Ensembl chr12:4,657,613...4,664,669 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:28069950) MGI PMID:28069950 NCBI chr22:9,869,502...9,871,659 JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:3,802,171...3,824,552
Ensembl chr 6:3,801,046...3,812,884 		JBrowse link
ribonucleoside diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK4 adenylate kinase 4 involved_in ISO (PMID:24767988) UniProt PMID:24767988 NCBI chr20:67,840,572...67,924,691 JBrowse link
ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT5 nudix hydrolase 5 involved_in ISO (PMID:18462755), (PMID:19699693), (PMID:21389046) UniProt PMID:18462755 PMID:19699693 PMID:21389046 NCBI chr 9:12,218,466...12,247,129 JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:80,371,154...80,399,193
Ensembl chr14:80,371,096...80,398,914 		JBrowse link
G CMPK1 cytidine/uridine monophosphate kinase 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:3010881 GO_REF:0000107 GO_REF:0000118 RGD:5133253 NCBI chr20:85,541,796...85,584,167
Ensembl chr20:85,541,205...85,584,068 		JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) involved_in ISO (PMID:30449682), (PMID:6249586) MGI PMID:6249586 PMID:30449682 NCBI chr 5:55,161,788...55,177,383
Ensembl chr 5:55,161,916...55,180,896 		JBrowse link
G UMPS uridine monophosphate synthetase involved_in ISO (PMID:2419341)
(PMID:6154574)		 MGI PMID:2419341 PMID:6154574 NCBI chr22:56,081,897...56,097,164
Ensembl chr22:56,082,103...56,097,105 		JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:21,528,520...21,574,330
Ensembl chr 8:21,543,888...21,574,311 		JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in ISO (MGI:1927266|PMID:10369669), (MGI:4881347|PMID:21074248) UniProt PMID:10369669 PMID:21074248 MGI:1927266 MGI:4881347 NCBI chr24:51,176,137...51,234,575
Ensembl chr24:51,181,859...51,231,078 		JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:92,722,960...92,769,563
Ensembl chr 9:92,723,015...92,768,558 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16919
    metabolic process 10498
      small molecule metabolic process 1712
        nucleobase-containing small molecule metabolic process 623
          nucleoside phosphate metabolic process 555
            nucleoside diphosphate metabolic process 136
              ribonucleoside diphosphate metabolic process 131
                purine ribonucleoside diphosphate metabolic process + 117
                pyrimidine ribonucleoside diphosphate metabolic process + 7
                ribonucleoside diphosphate biosynthetic process + 9
                ribonucleoside diphosphate catabolic process + 114
Path 2
Term Annotations click to browse term
  biological_process 16919
    metabolic process 10498
      organic substance metabolic process 10049
        organic cyclic compound metabolic process 5668
          nucleobase-containing compound metabolic process 5214
            nucleobase-containing small molecule metabolic process 623
              nucleoside phosphate metabolic process 555
                nucleoside diphosphate metabolic process 136
                  ribonucleoside diphosphate metabolic process 131
                    purine ribonucleoside diphosphate metabolic process + 117
                    pyrimidine ribonucleoside diphosphate metabolic process + 7
                    ribonucleoside diphosphate biosynthetic process + 9
                    ribonucleoside diphosphate catabolic process + 114
paths to the root